Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015885507.1_cds_XP_016439523.1_35071
CDS Infomation

[gene=LOC107765400] [db_xref=GeneID:107765400] [protein=probable pectinesterase/pectinesterase inhibitor 41] [protein_id=XP_016439523.1] [location=join(2992..4039,4634..5325)] [gbkey=CDS]
Sequence

ATGTGCATACCAAAAGCCATGGCAAAAAATTCTAACTTCTTTTTTGTTCATTTCGCCCTT
TTTTGCACTACACTTTTTCTGCTTATTCCAATCTTATTTTCTCAATCTTTTGCTGCTGAT
GTTCCTCCAAATACCCCTGTACCTCCCTCTGTTATTTGCAAATCCACTCCTTATCCTTCC
TTCTGTAGATCATCTGTGCTTCCACCAACAGGGAGTCCCAATGAAAATGTCTATGCCTAC
GGTCGAAAATCCGTCCGAAAATCTTTATCTTCAGCTCGTAAATTCTTGTCCCTTATCCAA
AAATACCTTCGAAAATCCAAACACTTAACAATCACTGCTGTCCGTGCACTAGAGGATTGC
CATTTTCTAGCAGGGCTTAACATGGATTACTTGTCAAGTTCTTTTAAAACTGTTAACGTG
ACATCGAAAATTCTCCCAGTTTTAGAAGCTGACGATGTGCAAACAATGCTCAGTGCAATT
TTGACAAACACACAAACTTGTTTAGATGGTCTTCAAGCAACATCCTCTGCTTGGAGTGTG
AGAAATGGCTTAGTCGCTCCACTTTCAAATGACACTAAACTTTATAGTGTTTCTTTAGCT
TTGTTCACAAAAGGGTGGGTTCCAAAGAAGAAAAATGGACTAAAAATTCGTCAACCTAGT
CAAAAAAAACTGTTCAAAAATGGCCAATTGTCGTTCCAAATGTCGGCACGAAACCAAGCA
ATTTTGGAAACAGTAAGCAGGAGAAAGCTTTTGCAGGAGCAGGAAAATAATGACCAAGTT
AACGTGAGTGACATTGTGATTGTCAATCAAGATGGAAGTGGGAATTTCACTACCATTAAT
GATGCAGTGGCGGCTGCTCCTAATAATACCAAAGTTGATGCAGGGTATTTCCTCATATAC
ATAACAGAAGGTGTGTACGAGGAGTATGTTGTCATTGCAAAGAACAAGAAGTATTTGATG
ATGATTGGTGATGGCATTAATCGAACCATCATTACAGGCAATCATAGCTTTGTTGATGGA
TGGACAACATTCAACTCTTCCACATTTTCTGTGGTTGGTCTAGGATTTGTTGCAGTTGAC
ATTACGTTCCAAAACACAGCAGGAGCAATCAAGCATCAAGCAGTTGCAGTCCGAAACGGT
GCTGATTTATCCACATTCTATAGCTGCAGCTTTGAGGCATACCAAGACACGTTATACGTA
CACTCTCTTAGGCAATTTTACAGAGAGTGTGACATTTATGGCACTGTCGATTTCATATTT
GGCAATGCAGCTGCTGTTTTCCAGAATTGCAACTTGTATCCACGTCTCCCTTTGCCCAAT
CAGTTCAATGCAATAACAGCTCAAGGCAGAACAGACATAAATCAAAACACTGGAATTTCA
ATCCATAATTGCACAATAAGACCTGCAGATGATTTGGCATTTAGCAGTAGTAGCACTAAA
ACATATCTTGGTAGGCCATGGAAGGAGTATTCGAGGACGATTTATATGCAATCTTATATG
GATGGTTTTATTCATCCATTAGGTTGGCATGATTGGTCTGGAGATTTCGCGCTAAACACG
TCTTATTATGCAGAGTTTAATAACACTGGACCGGGATCAAATACAACAGACAGAGTTACA
TGGCCTGCAATCCAAATTTTGAATGCTACTGATGCTGTTAATTTTACAGTATCTGGTTTT
CTAGTTGGAGATGATTGGTTGCCACAGACTGGAGTGCCATACTTCAATAGTTTACTGTAA

Peptide Sequence

PEP ID

XP_016439523.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 41 [Nicotiana tabacum]
Sequence

MCIPKAMAKNSNFFFVHFALFCTTLFLLIPILFSQSFAADVPPNTPVPPSVICKSTPYPS
FCRSSVLPPTGSPNENVYAYGRKSVRKSLSSARKFLSLIQKYLRKSKHLTITAVRALEDC
HFLAGLNMDYLSSSFKTVNVTSKILPVLEADDVQTMLSAILTNTQTCLDGLQATSSAWSV
RNGLVAPLSNDTKLYSVSLALFTKGWVPKKKNGLKIRQPSQKKLFKNGQLSFQMSARNQA
ILETVSRRKLLQEQENNDQVNVSDIVIVNQDGSGNFTTINDAVAAAPNNTKVDAGYFLIY
ITEGVYEEYVVIAKNKKYLMMIGDGINRTIITGNHSFVDGWTTFNSSTFSVVGLGFVAVD
ITFQNTAGAIKHQAVAVRNGADLSTFYSCSFEAYQDTLYVHSLRQFYRECDIYGTVDFIF
GNAAAVFQNCNLYPRLPLPNQFNAITAQGRTDINQNTGISIHNCTIRPADDLAFSSSSTK
TYLGRPWKEYSRTIYMQSYMDGFIHPLGWHDWSGDFALNTSYYAEFNNTGPGSNTTDRVT
WPAIQILNATDAVNFTVSGFLVGDDWLPQTGVPYFNSLL

Transcript Sequence

Gene sequence data has not been registered.